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Premier Biosoft beacon designer software
Beacon Designer Software, supplied by Premier Biosoft, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/beacon+designer+software/beacon+designer+software/pm42126798-75-19-22
Average 86 stars, based on 1 article reviews
beacon designer software - by Bioz Stars, 2026-10
86/100 stars

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Article Title: Harnessing metabolic control for synaptic stability: REST/NRSF links glycolytic inhibition to excitatory neurotransmission
Article Snippet: SYBR green RT-qPCR was performed in triplicate with 10 ng of template cDNA using QuantiTect Master Mix (Qiagen) on a 7900-HT Fast Real-Time System (Applied Biosystems), as previously described (Pozzi et al., 2013), using the following conditions: 5 min at 95°C, 40 cycles of denaturation at 95°C for 15 s and annealing/extension at 60°C for 30 s. Product specificity and occurrence of primer dimers were verified by melting-curve analysis. .. Primers were designed using Beacon Designer software (Premier Biosoft, Palo Alto, CA, USA) to avoid template secondary structure and significant cross-homology with other genes by BLAST search. ..

Article Title: Decoding the molecular 'terroir': Circular RNAs as stable environmental recorders for micro-geographical origin tracing of Pinggu peach.
Article Snippet: To address the persistent challenge of simply and accurately authenticating GI products against fraud from adjacent regions, this work employs an innovative molecular marker: circular RNA (circRNA).. Following highthroughput sequencing of Beijing Pinggu Peach, we identified a panel of six circRNAs that were differentially expressed between the GI and adjacent non-GI regions.. An OPLS-DA model built on these biomarkers achieved 100% accuracy in origin discrimination.

Article Title: Novel anti-Mullerian hormone receptor 2 binding peptide prevents chemotherapy-related ovarian follicle loss in a mouse model.
Article Snippet: Purpose Cancer treatments can deplete the ovarian follicle reserve causing infertility and early menopause, with subsequent decline in cardiovascular, cognitive, and overall health.. Medical measures to prevent this chemotherapy-induced ovarian damage are currently not available.. Anti-Müllerian hormone (AMH) is important for preserving the ovarian follicle pool via downregulation of granulosa cell replication and function.

Article Title: Sulfated Polysaccharide-Rich Fractions from Spirulina Platensis (SPPs) Exert Multi-Target Anticancer Activity in Non-Small Cell Lung Cancer (NSCLC) Cells
Article Snippet: .. Primers ( ) were designed using Beacon Designer Software (version 8.0, Premier Biosoft International, Palo Alto, CA, USA), employing a junction primer strategy. .. Statistical analyses were performed using GraphPad Prism version 9.0 for Mac (GraphPad Software, San Diego, CA, USA), and significant differences among different treatments were calculated using ordinary one-way ANOVA followed by Dunnett’s or Tukey’s post hoc.

Article Title: Dysregulation of MMP-2 and MMP-9 in Post-COVID-19 and IPF: Correlations with Systemic Inflammation and Endothelial Dysfunction.
Article Snippet: .. Primers were designed using Beacon Designer software (Premier Biosoft; https://www.premierbiosoft.com, accessed on 14 December 2024) and verified for specificity using NCBI BLAST tool (https://blast.ncbi.nlm.nih.gov, accessed on 25 December 2024). ..

Article Title: Mitochondrial Genome Analysis of Philippine Eagles ( Pithecophaga jefferyi Ogilvie‐Grant 1896) From the Greater Mindanao Faunal Region
Article Snippet: .. The resulting primer sequences, their position based on the Spilornis cheela mitogenome, and their in silico properties obtained from the Beacon Designer software (Free Edition, Premier Biosoft) are listed in Table . .. Long range PCR was performed using the Phusion High Fidelity 2X master mix (New England Biolabs) with the following PCR mix composition: 5 μL of Phusion HF buffer, 0.5 μL of 10 mM dNTPs, 1.25 μL each of the 10 mM forward and reverse primers, 0.25 μL of Phusion Hot Start II DNA polymerase, 0.75 μL of DMSO, 10.8 μL of nuclease‐free water and 2 μL of at least 30 ng genomic DNA for a total volume of 20 μL per reaction.

Article Title: High humidity or addition of ABA compensates for <i>dspEF</i> deletion mutation in <i>Pectobacterium carotovorum</i>
Article Snippet: Janak R. Joshi, Dhirendra Niroula, Cliff Hogan, Amy O. Charkowski* 1 Department of Plant Sciences and Plant Pathology, Montana State University, Bozeman MT 59717, U.S.A Previously Department of Plant Pathology, University of Wisconsin-Madison, Madison WI 53705 U.S.A.; Currently at Fujifilm Cellular Dynamics, Madison, Wisconsin Department of Agriculture Biology, Colorado State University, Fort Collins CO 80523, U.S.A

Article Title: Dysregulation of MMP-2 and MMP-9 in Post-COVID-19 and IPF: Correlations with Systemic Inflammation and Endothelial Dysfunction
Article Snippet: .. Primers were designed using Beacon Designer software (Premier Biosoft; https://www.premierbiosoft.com , accessed on 14 December 2024) and verified for specificity using NCBI BLAST tool ( https://blast.ncbi.nlm.nih.gov , accessed on 25 December 2024). ..

In Silico:

Article Title: Mitochondrial Genome Analysis of Philippine Eagles ( Pithecophaga jefferyi Ogilvie‐Grant 1896) From the Greater Mindanao Faunal Region
Article Snippet: .. The resulting primer sequences, their position based on the Spilornis cheela mitogenome, and their in silico properties obtained from the Beacon Designer software (Free Edition, Premier Biosoft) are listed in Table . .. Long range PCR was performed using the Phusion High Fidelity 2X master mix (New England Biolabs) with the following PCR mix composition: 5 μL of Phusion HF buffer, 0.5 μL of 10 mM dNTPs, 1.25 μL each of the 10 mM forward and reverse primers, 0.25 μL of Phusion Hot Start II DNA polymerase, 0.75 μL of DMSO, 10.8 μL of nuclease‐free water and 2 μL of at least 30 ng genomic DNA for a total volume of 20 μL per reaction.



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